#!/bin/csh
#
# Example of LSF batch job
#
# 1) Before submitting a job, be sure that the script is executable
#
# chmod +x test_batch.sh
#
# (and maybe it is also clever to try to run a *reduced* version of your script interactively)
# 
# 2) The job can be either spooled by stdin redirection of the script on the bsub command line:
# 
# bsub -q phenix_cas < test_batch.sh
#
#    or directly (in that case one can pass an argument to the script):
#
# bsub -q phenix_cas test_batch.sh 99
#
# 3) A bit more complete submission making use of bsub options:
# 
#    -L : sources your .login before starting the job
#    -J : gives a name to the job
#    -o : outputs the result of the job in a file (otherwise the output is mailed to you)
# 	  if LSF encounters an existing file with the same name as the output log file, 
#         appends the new output lines to the existing file. 
#
# bsub -q phenix_cas -L /bin/csh -J test_batch_job -o test_batch_job.o < test_batch.sh
#
#    -m : to specify your job to run in a given machine:
# 
# bsub -q phenix_cas -L /bin/csh -J test_batch_job -o test_batch_job.o -m rcas2071.rcf.bnl.gov < test_batch.sh
# 
# Embedded LSF options can be overridden by bsub command line options
#
# 4) To check the status:
#
# bjobs -w (your jobs in 'wide' format)
# bjobs -u all | grep phenix
# bjobs -u enterria ( -r = "running")
#
# 5) To visualize the output of your running jobs:
# 
# bpeek job_id
#
# Or take a look at the ~/.lsbatch/*.out files
# 
# 6) To kill the job:
# 
# bkill job_id
#    
#    To kill all your jobs:
#
# bkill -u enterria 0  
# 
# 7) Remind that if you want to acess your AFS zone from a batch job your AFS rights have to be "read" for "anyuser".
#    My acl:
# 
#    > fs la
#    Access list for . is
#    Normal rights:
#      system:administrators rlidwka
#      system:authuser rl
#      system:anyuser rl
#      enterria rlidwka      
# 
#    To change the acl:
#   
#    > fs setacl
#
# If you want to use this AFS directory from LSF, 
# you need to give system:anyuser the right access control list, namely read and list = rl.
#
# fs setacl /afs/rhic.bnl.gov/phenix/users/user/ system:anyuser rl

#source ~/.login  # <--- You do not need it if you submit your job with '-L /bin/csh' option

your job here ...