# program FELIX
source /opt/Xilinx/Vivado/2015.4/settings64.sh
vivado
open hardware manager
connect: always fails the first time after server boot
program with bitstream /home/maps/felix_firmware/bitstreams/FLX711_RM0304_6CH_LOCALCLK_SVNBLAHHHH_180124_16_53.bit

#configure FELIX after programming (if any step fails, reprogram; if server freezes and crashes, power cycle after it reboots itself):
su
cd /home/maps/meeg/felix/daq/felix_rcdaq/build/
source /home/maps/meeg/rcdaq/setup.sh;source /home/maps/meeg/felix/setup.sh
/home/maps/meeg/felix/software/pcie_hotplug/pcie_hotplug_remove.sh
/home/maps/meeg/felix/software/pcie_hotplug/pcie_hotplug_rescan.sh
/home/maps/felix_firmware/Si5345_40p8mhz_BNL-711v1p5_EXTERNAL_IN02.sh
flx-init
flx-config setraw -r 0x5890 -w 64 -v 0x1

raw data dump: ddump -g -n 100 rcdaq-00000001-0000.evt|less


# running online monitoring
cd /home/maps/meeg/felix/daq/felix_rcdaq/online_monitoring
source /home/maps/meeg/rcdaq/setup.sh;source /home/maps/meeg/felix/setup.sh
root -l ./scripts/run_om.C

## offline
root -l './scripts/open_file.C(15)'

list pixels with more than 100 hits (noisy pixels): process_histos(100)

# DAQ
## start timestamp script
cd /home/maps/meeg/felix/daq/felix_rcdaq
./make_timestampfile.sh

## start and configure rcdaq
su
cd /home/maps/meeg/felix/daq/felix_rcdaq
source /home/maps/meeg/rcdaq/setup.sh;source /home/maps/meeg/felix/setup.sh
./setup_felix_rcdaq_felixTrigger.sh
daq_set_runtype beam
(runtypes: beam junk calib)

## take a run
daq_begin
daq_end

## other useful stuff
event count: daq_status
kill rcdaq: daq_shutdown

# control PC:
nmcli connection down "Wired connection 1"
nmcli connection up "Wired connection 2"
ssh -p 222 root@192.168.168.2

ssh -Y 192.168.168.2
vncserver -geometry 1600x1200
vncviewer :1

source /home/maps/setup_anaconda.sh 
(RU power on, program)
../../modules/board_support_software/software/py/initGBTx_v1.py ../../modules/gbt/software/GBTx_configs/GBTx0_Config.xml 
(program again)
./testbench_JS_AT_SU_nopulse.py initialize_boards
(ALPIDE power on)
./testbench_JS_AT_SU_nopulse.py setup_sensors
./testbench_JS_AT_SU_nopulse.py setup_readout
../../modules/board_support_software/software/py/wrreg.py 8 29 0x3


# troubleshooting crap
watch -n 0.5 flx-i2c r 2:0:0x68 0x000D


#filename convention
cp -p rcdaq-00000001-0000.evt beamtest_rcdaq_bias0_clusteroff_strobewidth160clks_strobedelay0_triggerdelay12us_IBIAS64_VCASP86_VCLIP0_VRESETD147_ITHR40_IDB64_VCASN57_VCASN264_pulsed_reference